KEGG T01077: 7469236

Populus trichocarpa (black cottonwood): 7469236

Entry

7469236           CDS       T01077

Name

(RefSeq) ribonucleoside-diphosphate reductase large subunit

K10807

ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]

Organism

pop Populus trichocarpa (black cottonwood)

Pathway

pop00230

Purine metabolism

pop00240

Pyrimidine metabolism

pop00480

Glutathione metabolism

pop01100

Metabolic pathways

pop01232

Nucleotide metabolism

Module

pop_M00053

Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP

pop_M00938

Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP

Brite

KEGG Orthology (KO) [BR:pop00001]
09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    7469236
   00240 Pyrimidine metabolism
    7469236
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    7469236
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7469236
Enzymes [BR:pop01000]
1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     7469236
DNA repair and recombination proteins [BR:pop03400]
Eukaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    7469236

SSDB

Motif

Pfam:

Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone

Other DBs

NCBI-GeneID:

7469236

NCBI-ProteinID:

XP_002306711

UniProt:

B9H7U7

LinkDB

Position

5:20192430..20198111

AA seq 810 aa
MYVIKRDGRQEPVRFDKITARLKKLSYGLSNDHCDPVLVAQKVCAGVYRGVTTTQLDELA
AETAASMTANHPDYALLAARISVSRLHKNTKKSFSETIELMYNNLNKGSGQKAPLIADDV
YEIIMKNAERLDSEILYDRDFEYDYFGFKTLERSYLLKVDGKIVERPQHLLMRVAVGIHK
DDIESATKTYHLMSQSWFTHATPTLFNAGTAQPQLSSCFLLCMKDDSIEGIYDTLKECAV
ISKLAGGIGIAVHNIHATGSYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGAFAIY
LEPWHADIFEFLDLRKNHGKEEHRARDLFLALWIPDLFMERVRGDDKWSLFCPSEAPGLA
DCWGQEFEKLYTQYEREDRAKKIISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL
GTIKSSNLCTEVIEFTSPTETAVCNLASVALPRFVMERGVPAESQSSKMVGSRESKNRYF
DFEKLAEVTTTITANLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS
SEAKRLNKDIFETIYYHALRSSSELAAKDGPYETYCGSPVSKGILQMDMWGVTPSDRWDW
DALREMISKSGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVMNKHL
LNDLTEMGLWSPVLKNKIINESGSVSKIPEIPEQLKAIYKTVWEIKQKTLVDMAADRGCY
IDQSQSLNIHMEQPDLGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTVLNNEN
ANKAEDDVNSDMAQAACSLQNREECMACGS

NT seq 2433 nt +upstreamnt +downstreamnt
atgtacgtgatcaagcgagatgggcgccaagaaccggtacgttttgataagataactgct
cgattaaagaaattgagttatgggttaagtaacgatcactgtgatccagtgcttgtggca
cagaaagtctgtgcaggggtttatagaggtgtcactacaacccagcttgatgagttagct
gctgagaccgcggcttctatgactgctaatcaccctgattatgctttgttggctgcaaga
atttctgtctcgaggctgcataagaatacaaaaaaatccttctcagagacgatcgaatta
atgtataacaacttaaataaggggtctgggcagaaggctcctctcattgcagatgatgtc
tacgaaataatcatgaagaatgctgaacggctggacagtgagatcctctatgacagggat
tttgaatatgattattttggcttcaaaactcttgagaggtcctaccttttgaaggttgat
ggaaagattgtagaaagaccacagcacctactgatgagagtggctgttggtatccacaaa
gatgacattgaatctgccaccaaaacttatcacttaatgtctcaaagttggttcactcat
gctacccctacccttttcaatgcagggactgcccagcctcaattgagcagttgctttctc
ctgtgcatgaaagatgacagcattgaaggcatatatgatactctgaaggagtgtgctgtt
attagcaaattagctggaggaattggtattgctgttcataatatccacgccacaggcagt
tacattcgggggacaaatggtacttccaatggtatagttcccatgcttcgagtgttcaac
aacactgctcgctatgttgatcaaggaggagggaagaggaaaggtgctttcgctatatat
ctggagccatggcatgccgatatctttgagtttctagatctcagaaaaaaccatggaaag
gaagaacatcgagctcgagacttattccttgctctttggattcctgatctcttcatggaa
agagttcgaggtgatgacaaatggtctttgttttgccctagtgaggctccaggtttggct
gattgttggggacaagaatttgaaaaactgtatactcagtatgaaagagaggatagggca
aagaaaattatttcagctaggaaactctggtttgagattttaaattcccaaattgaaaca
ggaacaccttacatgctcttcaaggattcttgcaacaggaaaagcaaccagcagaatctg
ggcactatcaagtcctcaaacctctgtactgaagttattgagttcacaagtccaacagaa
acagcagtttgcaatctggcatccgttgctcttccacgatttgtcatggaaaggggggta
cctgcggaatcacagtcttccaagatggttggaagtagagaatcaaagaacagatacttt
gattttgaaaaactagcagaggttacaacgacgatcactgcaaatcttaataaaatcata
gatgttaattactatcccgttgaaactgcaaggaggtcaaatttaagacacagaccaatt
ggtattggtgttcaaggtcttgctgataccttcattttgcttggcatgccatttgattca
tcagaggcaaaaaggctaaacaaagacatatttgaaaccatatactaccatgctctgaga
tcttcttctgagctggctgctaaagatggcccttatgaaacatattgtggaagccctgtg
agcaaggggattttgcagatggacatgtggggtgtgacaccatcagataggtgggattgg
gatgctcttagggaaatgatctccaaaagtggtgtaagaaattcccttctcatagcgcct
atgcccactgcttcaacaagtcagatacttggcaacaatgaatgttttgagccttataca
tccaatatctatagccgcagagttttaagcggcgaatttgttgtgatgaacaaacacctc
cttaatgatttaacggagatgggtctctggtcacctgttcttaaaaacaagataataaat
gaaagtggctcggtttcaaaaatccctgagattcccgagcagctaaaagctatctataag
acggtgtgggaaatcaagcaaaagacattggttgacatggctgctgatcgtggatgctac
atagaccaaagtcagagtctgaatattcacatggagcaacctgatcttgggaaactaact
tccctgcatttccatgcttggtcaaagggcctgaaaacaggtatgtactacctgagaaca
cgtgctgctgcagatgctatcaaattcactgttgacacaactgttctcaacaatgaaaat
gctaacaaggcagaggatgatgttaattctgatatggcgcaggcagcatgctcattgcag
aaccgggaagagtgcatggcttgtggaagttaa

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