Cyclopterus lumpus (lumpfish): 117730250
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Entry
117730250 CDS
T09199
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03320
PPAR signaling pathway
clum04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117730250 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117730250 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clum03310
]
117730250 (pparg)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117730250 (pparg)
Nuclear receptors [BR:
clum03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
117730250 (pparg)
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Gene cluster
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117730250
NCBI-ProteinID:
XP_034387687
Ensembl:
ENSCLMG00005002037
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All DBs
Position
5:complement(17548322..17575807)
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AA seq
554 aa
AA seq
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MQTPGTEFNHQIGHNYSVDMVDTQQLLAWPVGFSLNAVELSELDDSSHSLDMKHLSTLDY
ASISSSSSIPSSLSPPLVSSISSAGVAYDLSPSQNEEQLTNMDYTNMYSYRTELDKHNLI
KLEPRSPPQYSDNAVFSKLQDDTSPAALNIECRVCGDKASGFHYGVHACEGCKGFFRRTI
RLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLNVGMSHNAIRFGRMPQAEKEKLLAEFSS
DVVHMHPDAADLRALARHLYEAYLKYFPLTKVKARAILSGKTGDNVPFVIHDMKSLMEGE
QFINCKQIPIQEQQHQSYALTAGLGGIIGAHQETEYGFLGMGMSISGQAPSDALELRFFH
SCQSRSAEAVREVTEFAKSIPGFIDLDLNDQVTLLKYGVIEVLIIMMAPLMNKDGTLISY
GQIFMTREFLKSLRKPFSQMMEPKFEFSVKFNTLELDDSDMALFLAVIILSGDRPGLLNV
KPIEQLQETVLHSLELQLKLNHPDSLQLFAKLLQKMTDLRQIVTDHVHLIQLLKKTEVDM
CLHPLLQEIMKDLY
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccaggcacagagtttaaccatcaaattggtcacaactactcagtagacatg
gtggacacccagcagctcctagcttggcccgtcgggttcagtctgaacgccgtggagctg
tcggagctggacgacagctcccactccctcgacatgaagcatttgtccacattagactac
gcctccatctcctcctcctcctccatcccgtcctccctgtctcccccgcttgtatcctcc
atctcctctgccggtgtggcctatgacctcagtccgtcgcagaatgaagaacaactgacc
aacatggactacacaaacatgtacagctacagaacggagctagacaagcacaatttgatc
aagctggagccgaggtcacctccacagtactctgacaatgccgtgttctccaagctccag
gacgatacgtcgccagcagcgctaaacatcgagtgccgtgtgtgtggagacaaagcttca
gggtttcactatggcgtccatgcctgtgagggctgtaagggtttcttcagacgcacaatc
aggttaaagttggtgtatgaccactgtgatcttcactgtcgcattcacaagaagtcccgc
aacaaatgccaatactgtcgcttccagaagtgcctcaacgtcggcatgtcacacaacgcc
attcgttttggccgaatgccccaggcggagaaggagaaactgctggctgagttctcatcg
gacgtggtgcacatgcacccggacgcagcagatctgagggctctggcccggcatctgtat
gaggcctatctgaaatacttccccctcaccaaggtcaaggccagggccattctctctggg
aagaccggagacaacgtgcctttcgtcatccacgacatgaagtcactcatggaaggagag
cagtttattaattgtaagcagatacccatccaggagcaacagcatcagtcatacgcccta
acagcaggacttggaggaatcataggagctcaccaggagacagagtatggctttttggga
atgggaatgagcatcagtggacaggcgccatcggacgctttggagctgcgtttcttccac
agctgtcaatcacgttcggccgaagcagtgagagaagtgacggagttcgccaagagtatc
ccagggttcatcgatctggatctcaatgatcaggtgactttgctgaagtacggtgtgatc
gaggtcctgatcatcatgatggcgcctctgatgaacaaagacgggaccctgatctcctac
ggacagatcttcatgacgcgggagttcctcaagagtctcaggaaacctttcagtcaaatg
atggaaccaaagtttgaattctcagtcaaattcaacacgctggagctggacgacagcgac
atggcactgtttctggctgtcattatcctcagcggagaccgcccaggcctgctgaacgtg
aagcccatcgagcagctgcaggagacggtgctgcattcacttgagctgcagctgaagcta
aaccacccagactctctgcaactgttcgccaagctgctccagaaaatgaccgacctgcgt
cagatcgtaaccgatcacgtccacctcatccagctgctgaaaaagacggaggtggacatg
tgcttacacccgctactgcaggagatcatgaaggacttgtattag
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integrated database retrieval system
