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BUG: quantile should error when weights are all zeros #28595
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293ea24
added err messages and tests
Tontonio3 ae8cd54
Modified tests and added release note
Tontonio3 565fc75
Fixed tests
Tontonio3 8309d16
Fixed bug to handle object dtypes
Tontonio3 04d05f6
Fixed bug to handle object dtypes
Tontonio3 c76b5ad
Streamlined testing, improved error handling capabilities
Tontonio3 bfcec09
Changed infinite error message
Tontonio3 f06a1f8
Bug fix
Tontonio3 1303b3c
Fixed lint test
Tontonio3 ad95df2
Improved testing
Tontonio3 dc14e6b
Changed error handling, made it faster, removed dtype=object special …
Tontonio3 8eeed6a
More comprehensive testing
Tontonio3 4fe3444
More comprehensive testing
Tontonio3 ba2c398
Fixed lint
Tontonio3 2e8e2ea
Fixed tests
Tontonio3 3a20796
Fixed CircleCI test
Tontonio3 40075b3
streamlined checks
Tontonio3 a83887b
lint fix
Tontonio3 3d1c7b0
lint fix
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Original file line number | Diff line number | Diff line change |
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@@ -0,0 +1,7 @@ | ||
Improved error handling in `np.quantile` | ||
---------------------------------------- | ||
`np.quantile` now raises errors if: | ||
|
||
* All weights are zero | ||
* At least one weight is `np.nan` | ||
* At least one weight is `np.inf` |
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Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -4142,6 +4142,31 @@ def test_closest_observation(self): | |
assert_equal(4, np.quantile(arr[0:9], q, method=m)) | ||
assert_equal(5, np.quantile(arr, q, method=m)) | ||
|
||
@pytest.mark.parametrize(["err_msg", "weight"], | ||
[("Weights must be finite.", [1, np.inf, 1, 1]), | ||
("Weights must be non-negative.", [1, -np.inf, 1, 1]), | ||
("Weights must be finite.", [1, np.inf, 1, np.inf]), | ||
("At least one weight must be non-zero.", np.zeros(4))]) | ||
@pytest.mark.parametrize("dty", ["f8", "O"]) | ||
def test_inf_zeroes_err(self, err_msg, weight, dty): | ||
|
||
m = "inverted_cdf" | ||
q = 0.5 | ||
arr = [1, 2, 3, 4] | ||
wgts = np.array(weight, dtype=dty) | ||
with pytest.raises(ValueError, match=err_msg): | ||
a = np.quantile(arr, q, weights=wgts, method=m) | ||
|
||
@pytest.mark.parametrize("weight", [[1, np.nan, 1, 1], [1, np.nan, np.nan, 1]]) | ||
@pytest.mark.parametrize(["err", "dty"], [(ValueError, "f8"), ((RuntimeWarning, ValueError), "O")]) | ||
def test_nan_err(self, err, dty, weight): | ||
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m = "inverted_cdf" | ||
q = 0.5 | ||
arr = [1, 2, 3, 4] | ||
wgts = np.array(weight, dtype=dty) | ||
with pytest.raises(err): | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. might as well use |
||
a = np.quantile(arr, q, weights=wgts, method=m) | ||
|
||
class TestLerp: | ||
@hypothesis.given(t0=st.floats(allow_nan=False, allow_infinity=False, | ||
|
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can't you just say
else
here?There was a problem hiding this comment.
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I can't just say else here, as the first if will be true if only one of the weights is 0, which is valid
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you can move the
== 0
to the sum to simplify this, though.IMO the checks may be clearer as
not all(weights >= 0)
to reject NaNs right away, but doesn't matter much so long the== 0
case is handled below.Also, why not use
isfinite
?